Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918734.1_cds_XP_016468117.1_60792
CDS Infomation

[gene=LOC107790677] [db_xref=GeneID:107790677] [protein=cytokinin dehydrogenase 5-like] [protein_id=XP_016468117.1] [location=join(48935..49514,50346..50473,51084..51359,52688..52950,54968..55304)] [gbkey=CDS]
Sequence

ATGGCTACTAAACTTTTGTTGACACTTGCTATATGTCGGCTTATTGTAACCGTCGGGTTT
AGGTTTGACCCGACTGAGCTTTTACGGCTCGGGCTCAACGGAAACCTCAGCGTGGCGGTA
GCCGATTTAGAAACTGCGTCCGTGGACTTCGGCGGGTTGCATAGAGCTGAGCCGATGGCG
GTTCTTAACCCGGCTACAGCCGAGGACGTAGCGCGGCTTGTGAAAGCCGCGTACGACTCG
GCTCATGGGTTTACCGTGTCGGCTAGAGGACACGGACATTCTATAAATGGACAGGCTATG
ATAACAAATGGTGTTGTGATCCAAATGAGCGGCGGCTCTAACTCTAAGCAGAAGTTATTG
ACCGAGGTTTCGGAGAAATTCATGTATGCTGATGTGTGGGGTGGAGAGTTATGGATAGAT
GTGTTGACGTCCACCTTAGAGTATGGACTTGCACCAAAATCATGGACTGATTACTTGTAC
TTATCTGTGGGTGGTACCCTCTCCAATGCTGGTATTAGTGGACAAGCTTTCAATCATGGC
CCTCAAATTAACAATGTTCATGAGCTTGATGTTGTTACAGGTAAGGGTGAGCTATTAACA
TGTTCAGAAAAAGAAAACTCCGAGCTGTTTCATGCTGCTCTTGGTGGATTAGGACAATTT
GGGATTATAACAAGGGCAAGAATTGCACTTGAACAAGCTCCCCAAAGGGTGAGGTGGATC
CGAGTTTTATATTCAAATTTTTCAACATTTACCGAAGACCAAGAATATCTAATATCTCTA
CATGGAAAACCAGCTTCCCAAAAATTTGACTATGTTGAAGGATTTGTTATAGTTGATGAA
GGCCTCATTAACAACTGGAGATCTTCTTTTTTCTCCCCAAGTAACCCTGTCAAGATTTCT
TCTCTTAAGTCTGAAGGAGGAGTTTTATATTGCTTAGAAATCACCAAAAATTATCACCTT
TCAAATGCTGATATCGTTGACCAGGAGATAGAGACATTGTTAAAGAAGCTAAAATATATA
CCAGCATCAGTTTTTACAACAGACCTTCCTTACGTGGATTTCTTGGACCGGGTTCACAAG
GCAGAGTTGAAACTCCGGTCTAAAGGATTGTGGGAAGTGCCACACCCATGGCTAAACCTA
TTTGTCCCAAAATCAAGAATTGCAGACTTCGATAAAGGAGTTTTTAAGGGCATTTTGGGG
AATAAGACCAGTGGTCCCATACTCATCTACCCCATGAACAAGAACAAGTGGGACGAGAGG
AGTTCAGTAGTGACGCCAGAAGAGGAAGTGTTTTACTTAGTGGGATTTCTGAGGTCAGCA
TTGACAAATGGTGACGAGACACAAACATTAGAGTACCTCAGCAATCAAAACTACCAAATA
TTGAAGTTTTGTGAAGATGCAAAGATCAAAATCAAACAATACCTGCCTCATTACACAACA
CAAAGAGAATGGAGGGACCATTTTGGAGATAAATATTGGACCAGATTTCAGCAAAGGAAA
TTAGATTTTGACCCAAGACATATTTTAGCCACCGGCCAACGCATTTTCATGCCTTCTTTT
AATCCTAATACTGCCTCTTGGTGA

Peptide Sequence

PEP ID

XP_016468117.1
PEP Infomation

PREDICTED: cytokinin dehydrogenase 5-like [Nicotiana tabacum]
Sequence

MATKLLLTLAICRLIVTVGFRFDPTELLRLGLNGNLSVAVADLETASVDFGGLHRAEPMA
VLNPATAEDVARLVKAAYDSAHGFTVSARGHGHSINGQAMITNGVVIQMSGGSNSKQKLL
TEVSEKFMYADVWGGELWIDVLTSTLEYGLAPKSWTDYLYLSVGGTLSNAGISGQAFNHG
PQINNVHELDVVTGKGELLTCSEKENSELFHAALGGLGQFGIITRARIALEQAPQRVRWI
RVLYSNFSTFTEDQEYLISLHGKPASQKFDYVEGFVIVDEGLINNWRSSFFSPSNPVKIS
SLKSEGGVLYCLEITKNYHLSNADIVDQEIETLLKKLKYIPASVFTTDLPYVDFLDRVHK
AELKLRSKGLWEVPHPWLNLFVPKSRIADFDKGVFKGILGNKTSGPILIYPMNKNKWDER
SSVVTPEEEVFYLVGFLRSALTNGDETQTLEYLSNQNYQILKFCEDAKIKIKQYLPHYTT
QREWRDHFGDKYWTRFQQRKLDFDPRHILATGQRIFMPSFNPNTASW

Transcript Sequence

Gene sequence data has not been registered.